Runner's Flu: Why You Feel Sick After Running a Marathon

What Is Runner’s Flu, and Why Do You Get Sick After a Marathon?

What Is Runner’s Flu, and Why Do You Get Sick After a Marathon?
Jose Carlos Cerdeno/iStock; iStock

After months of intense training and finally crossing the finish line, you find yourself sick after running a marathon. Whether it’s stomach upset or flu-like symptoms, it’s normal to feel sick after a race — and it’s more common than you may think.

While there can be many factors at play, experts say that what goes on inside your body during a marathon, as well as how you train for the big day, may contribute to illness.



3 Reasons You May Feel Sick After a Marathon

New Jersey-based running coach Erica Coviello, a Road Runners Club of America (RRCA)–certified running coach and an American Council on Exercise (ACE)–certified personal trainer, has seen her athletes get wiped out post-marathon. “It could be a combination of things,” she says. “A marathon totally depletes you, and there are a few reasons why you might feel awful.”

1. Gastrointestinal Issues

Upset stomach and the need for urgent bathroom breaks are common among marathon runners.

“When you hear about people needing bathroom stops and their gut being totally destroyed, it’s usually because when you’re running the marathon, your [physical] stress levels go high,” says Coviello. “It puts you into that flight-or-fight response mode, and in doing that, your blood flow changes and your body is like, ‘What the heck is going on?’ It reroutes the blood to essential organs and away from your gut.”

This leading theory explains why you may feel nauseous or like you need to rush to the nearest portable restroom mid-race. And, according to Coviello, this response can continue on for several days after your marathon.

2. ‘Post-Marathon Depression’

Perhaps just as common as the marathon flu is the marathon blues, which is a feeling of loss and sadness following the race.

“You spend so much time and so much of your schedule regimented toward that one event,” says Coviello. “Whether you completely crush your goals or you have completely failed, that’s the climax. Then you’ve got a day or two of celebration, and then many people wonder what they’re supposed to do now.”

That void can feel like depression, and if you have already been diagnosed with a mental health condition like depression or anxiety, it can exacerbate symptoms.

“There is a real physical manifestation of that,” says Coviello. “And if that’s why you feel crappy, you have to treat it like a real thing to recover.”

3. You Have an Infection

For many reasons, the marathon flu is usually just that: a real flu, cold, sinus infection, or other virus that requires rest and care.

What Runner’s Flu Really Feels Like

Symptoms of runner’s flu vary, with most runners saying they feel like they have a cold with:

  • Body aches
  • Cough
  • Fever or chills
  • General malaise
  • Headache
  • Runny nose
Of course, some of these symptoms could also come from allergies, and you may just need a shower and some anti-allergy medication.

See your doctor right away if you feel like you’re dealing with more than cold or flu symptoms, such as:

  • Dark-colored urine
  • Extreme fatigue
  • Severe muscle cramps
  • Vomiting
These symptoms may be signs of rhabdomyolysis, a rare, life-threatening condition in which damaged muscle tissue breaks down and releases toxic substances into the bloodstream. It can be triggered by high-intensity exercise.

Causes of Marathon Flu

Athletes who take part in strenuous endurance exercise may experience depleted immunity, with “arduous bouts of exercise” linking to increased symptoms of upper respiratory tract infections. This response could be due to several factors, including environment, genetics, physical and mental stressors, and underlying health conditions.

Ian McKeag, MD, an associate professor of family and community medicine at the University of Alabama at Birmingham’s School of Medicine, explains how strenuous exercise (like running 26.2 miles in one go) affects the body.

“When you’re running a marathon — or even a half-marathon — you’re putting yourself through a lot of physical demands,” he says. “You’re burning all sorts of energy, expending glucose and glycogen, and the body is only really equipped for about an hour before it starts to pull from other sources. As it starts to pull from some of those sources, that puts more demand on the body as a whole.” Immunity dips, leaving you at risk of getting sick.

There’s also a lot going on with your hormones during training that can cause issues.

“When you’re training for a marathon and persistently putting the body in that kind of stress, things like cortisol levels change,” says Dr. McKeag. “That stress hormone can have a negative impact on your immune response [and can be] one reason the immune system isn’t as strong after running longer distances.”

Another big factor is exposure to germs.

“On the day of the race, runners are put into a corral packed with other runners, and there’s a bottleneck for the first few miles of the race,” says McKeag. “You’re going to be exposed to a big, diverse group of people.”

Coviello agrees, noting that you can also be exposed to infectious bugs while traveling to a race.

“And in the race, when your immune system is already compromised, you’ve got all these germs that are around you,” she says. “Then you’ve got people throwing snot rockets all over the place. And at the end of the race, you’ve got all these snot- and sweat-filled bodies, and everybody's hugging each other.”

How to Prevent Runner’s Flu

After a marathon, you’re going to be run down, and runners pass germs to each other all the time, especially in big races. But even if the odds are stacked against your health on race day, McKeag and Coviello say not to despair. There are things you can do before the marathon to improve your chances of staying healthy.

“It’s the other stuff that [runners] aren’t doing to take care of themselves throughout training, in my opinion, that’s really putting them at the greatest risk: refueling, rehydrating, getting restful sleep, and controlling stress, especially after any run greater than an hour,” says McKeag.

Nailing your sleep and food intake are two things that can help make sure you’re feeling your best before, during, and after a marathon. If you want to be proactive, focus on micronutrients as well as macronutrients in your diet, says Coviello.

“You have to find your good ratio [of macros] and make sure you’re getting enough calories from carbohydrates, protein, and fat,” she says. “But your immune system also relies on the right micronutrients — especially things like vitamin C — before the race so that your body isn’t playing catch-up.”

How to Treat Runner’s Flu Post-Marathon

When it comes to recovering from the marathon flu, there’s no magic pill or potion. Patience and self-care are the name of the game. McKeag says the best remedies are the three golden R’s: refuel, rehydrate, and recover.

“Get some good sleep, get some good food in you, and always, always stay well-hydrated,” he says.

Treat your symptoms like you would any other cold or flu: Drink warm and soothing fluids, hydrate with water and electrolytes, take pain relievers as needed, and eat nourishing foods with vitamins, minerals, and protein.

Your body will need rest, so don't get hung up on missing miles, especially if you have a fever.

“If your temperature is above 100.4 degrees Fahrenheit, you shouldn’t exercise — no ifs, ands, or buts,” says McKeag. “And if you just feel like crap, take time off training.”

Even if you’re not sick, Coviello advises taking a full two weeks off from running after a marathon to give your immune system, muscles, heart, lungs, stomach, and brain a chance to fully recover.

The Takeaway

  • Runner’s flu can occur after a marathon and leave you feeling run-down with symptoms like sore throat, runny nose, fatigue, and fever or chills.
  • A dip in immunity due to strenuous exercise combined with exposure to germs from a large number of runners on race day can raise your risk of marathon flu.
  • Taking precautions while training, including prioritizing nutrition, sleep, and hydration, can help prevent sickness after running a marathon.
EDITORIAL SOURCES
Everyday Health follows strict sourcing guidelines to ensure the accuracy of its content, outlined in our editorial policy. We use only trustworthy sources, including peer-reviewed studies, board-certified medical experts, patients with lived experience, and information from top institutions.
Resources
  1. Common Cold. Mayo Clinic. May 24, 2023.
  2. Allergies. Cleveland Clinic. April 1, 2025.
  3. Rhabdomyolysis. Cleveland Clinic. February 24, 2023.
  4. Simpson RJ et al. Can Exercise Affect Immune Function to Increase Susceptibility to Infection? Exercise Immunology Review. January 2020.
  5. Manage Common Cold. Centers for Disease Control and Prevention. April 24, 2024.
Kara-Andrew-bio

Kara Andrew, RDN, LDN

Medical Reviewer

Kara Andrew, RDN, LDN, is the director of health promotion for Memorial Hospital in Carthage, Illinois. She is also licensed as an exercise physiologist and certified in lifestyle medicine by the American College of Lifestyle Medicine. Her experience includes corporate wellness, teaching for the American College of Sports Medicine, sports nutrition, weight management, integrative medicine, oncology support, and dialysis.

She earned her master's in exercise and nutrition science at Lipscomb University.

Andrew has served as a president and board member of the Nashville Academy of Nutrition and Dietetics. She was recently elected a co-chair of the fitness and medicine group in the American College of Lifestyle Medicine.

Ali Nolan

Author

Ali Nolan is the author of Master the Marathon: The Ultimate Training Guide for Women, which offers a holistic approach to training for long distances. She is a four-time marathoner and a dozen-time half-marathoner who is passionate about fitness and movement at all speeds and in every form.

She is the digital editor of Outside Run and formerly worked at Runner’s World. You can find her writing in Bicycling, Outside, Self, and Women’s Health.

In addition to running, she loves hiking with her humongous dog, practicing yoga, spending hours on the tennis court, and recovering on the couch with her cats.