How to Tell What’s Causing Diarrhea — Salmonella, Cyclosporiasis, or Another Germ
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What’s Causing Your Diarrhea — Salmonella, Cyclosporiasis, or Something Else?

With multiple large outbreaks of foodborne illness, you may be wondering if you can even determine what’s causing your symptoms. Experts share what you need to know.
What’s Causing Your Diarrhea — Salmonella, Cyclosporiasis, or Something Else?
Everyday Health
It’s been a doozy of a summer when it comes to food poisoning. More than 10,000 Americans have gotten sick from a cyclosporiasis outbreak linked to contaminated lettuce, while two salmonella outbreaks tied to jalapeños and eggs have likewise led to hundreds of reported illnesses.

If you suddenly come down with a stomach bug, can you even be sure what caused it?

“These foodborne illnesses all involve the gastrointestinal tract, so they can have very similar symptoms,” says William Schaffner, MD, a professor of infectious diseases at Vanderbilt University in Nashville, Tennessee, and a spokesperson for the Infectious Diseases Society of America. “Most people feel miserable for a period of time and recover with supportive care, but specific treatments in more severe cases are different, so knowing which illness you have is important.”

By looking back at what you’ve eaten and identifying specific symptoms, doctors are better equipped to make a probable diagnosis and recommend the best treatment. Definitive diagnosis often requires lab testing, though.

Cyclosporiasis and Salmonella Are Usually Linked to Different Kinds of Foods

Cyclospora (the parasite that causes cyclosporiasis) and salmonella (the bacterium behind salmonellosis) both infect humans through food or water contaminated with human feces. However, they tend to be associated with different kinds of foods.

Outbreaks of cyclosporiasis are commonly linked to fresh produce, including:

  • Leafy greens and lettuce
  • Cabbage
  • Basil
  • Cilantro
  • Parsley
  • Broccoli
  • Snow peas
  • Sugar snap peas
  • Raspberries
Salmonella often spreads through raw or undercooked meats, although fresh produce and eggs can also be contaminated. Typical sources include:

  • Chicken
  • Beef
  • Turkey
  • Seeded vegetables like tomatoes
  • Nuts

Contaminated foods can spread germs to other food items if not handled properly. Unwashed hands, chopping boards, and knives can also spread these germs in the kitchen.

Symptoms of Cyclosporiasis and Salmonella Can Overlap

Salmonella infections and cyclosporiasis have several symptoms in common, especially in the early stages. These include:

  • Diarrhea
  • Stomach cramps
  • Bloating
  • Loss of appetite
  • Nausea
  • Vomiting
  • Tiredness
  • Headache

As with any illness that causes diarrhea or vomiting, dehydration is a primary complication and major concern, warns Dr. Schaffner.

“You can obviously lose fluid through vomiting and diarrhea, and we always underestimate the amount of fluid loss,” he says. “Dehydration is especially a risk for the very young and the very old because they’re more fragile, as well as for people with chronic underlying medical conditions such as diabetes. It can make your diabetes control go out of whack.”

When there is less water in your body, there’s less liquid in your bloodstream. This can cause glucose to concentrate more in your blood, leading to high blood sugar levels.

How Do Cyclosporiasis Symptoms Differ From Those of Salmonella Poisoning?

While similar signs of illness make the two hard to distinguish, there are differences.

Symptom Onset

Symptoms of salmonella poisoning can begin six hours to six days after exposure, and they come on fast.

Cyclosporiasis takes time to build up in the body, so symptoms begin later, from two days to two weeks after eating contaminated food.

Duration

Salmonella symptoms tend to last four to seven days, while cyclosporiasis symptoms can continue for weeks or even months.

Recurrence

Salmonella sickness is a one-and-done episode. Cyclosporiasis symptoms can pass and then start up again. “The body has a more successful method in its inflammatory response to get rid of the bacteria than it does the parasite,” says Schaffner. “The Cyclospora parasite is able to hang out in the body for longer periods of time before it is eliminated.”

Type of Diarrhea

With salmonella poisoning, diarrhea can contain blood or mucus. Diarrhea from cyclosporiasis is more likely to be watery and explosive. It’s also less likely to be bloody because it doesn’t cause as much tissue inflammation as salmonella.

Fever and Serious Complications

Both infections are usually not life-threatening, but salmonellosis carries a higher risk of severe complications, says Norman Beatty, MD, an associate professor of infectious diseases and global medicine at the University of Florida College of Medicine in Jacksonville.

“With salmonella infection, you are more likely to have a fever and possibly develop sepsis,” says Dr. Beatty. Sepsis is an extreme immune response to infection that can be fatal without treatment. “Fever and sepsis would be uncommon with cyclosporiasis. It’s really just an organism that disrupts the normal flora [microbial content] of the gastrointestinal system.”

Salmonella Is Contagious, but Cyclosporiasis Is Not

Salmonella poisoning can be contagious, spreading from one person to another through unwashed hands or sexual contact.

The same is not true for cyclosporiasis. “A human with cyclosporiasis is really noninfectious to another human because the Cyclospora parasites really have to contaminate an environment and mature before becoming infectious,” says Beatty.

Treatments Depend on the Illness

With so much diarrheal illness circulating currently, Schaffner encourages people who get sick to see a healthcare provider soon after symptoms appear.

“If it is cyclosporiasis, you don’t want this recurrent infection that can go on for weeks,” he says. “You want to get the appropriate antibiotic that can treat it.”

The first-line treatment is trimethoprim-sulfamethoxazole, sold under the brand names Bactrim, Septra, or Cotrim.

For severe salmonella infection, doctors may recommend antidiarrheal medications or antibiotics. Mayo Clinic cautions, however, that antibiotics are not helpful in most cases.

For both illnesses, it’s also important to drink lots of fluids, get plenty of rest, and eat fairly bland foods.

Could Something Else Be Causing Your Diarrhea?

Several other foodborne illnesses regularly cause outbreaks in the United States, but because symptoms are similar, it can be challenging to know what specific illness you have unless lab testing is performed.

Other common causes of food poisoning include:

  • Norovirus This germ accounts for about 58 percent of food poisoning cases in the United States, but norovirus outbreaks usually happen seasonally in colder months.

  • E. coli These infections cause hundreds of thousands of illnesses every year. These bacteria are the most common cause of “traveler’s diarrhea,” acquired from dirty food or water in regions with poor sanitation, says Beatty.
  • Listeria These bacteria can contaminate a variety of foods, says Schaffner. “Listeria is one of those very rare bacteria that can actually multiply at refrigerator temperature,” he says. “Other bacteria go dormant at that temperature, but Listeria can actually grow.”
  • Campylobacter These bacteria are a common cause of diarrheal illness worldwide, often associated with undercooked poultry and raw milk.

How to Lower Your Risk of Food Poisoning

Experts offer the following advice to decrease your risk of salmonella poisoning, cyclosporiasis, and other foodborne illnesses:

  • Wash your hands before and after preparing food.
  • Wash all fruits and vegetables thoroughly under running water before eating, cutting, and cooking.
  • Scrub firm fruits and vegetables, such as melons and cucumbers, with a clean produce brush.
  • Cut away any damaged or bruised areas on fruits and vegetables before preparing and eating. Remove outer leaves of lettuce and cabbage.
  • Avoid precut and packaged produce. They have undergone more handling and exposure to potential sources of contamination.
  • Consider buying locally sourced produce (at a farmer’s market, for example), which is less likely to be contaminated.
The Cyclospora parasite is particularly hardy, so routine rinsing or washing of produce is unlikely to kill it.

Heat is needed to reliably eliminate the parasite, so health officials advise consumers to cook their food to 158 degrees F or higher when they can.

EDITORIAL SOURCES
Everyday Health follows strict sourcing guidelines to ensure the accuracy of its content, outlined in our editorial policy. We use only trustworthy sources, including peer-reviewed studies, board-certified medical experts, patients with lived experience, and information from top institutions.
Resources
  1. Surveillance of Cyclosporiasis. Centers for Disease Control and Prevention. August 4, 2026.
  2. Salmonella Outbreak Linked to Jalapeños. Centers for Disease Control and Prevention. August 10, 2026.
  3. Salmonella Linked to Shell Eggs. Centers for Disease Control and Prevention. July 24, 2026.
  4. Cyclospora. U.S. Food and Drug Administration. July 16, 2026.
  5. How Salmonella Infections Happen. Centers for Disease Control and Prevention. October 4, 2024.
  6. Symptoms of Cyclosporiasis. Centers for Disease Control and Prevention. February 26, 2024.
  7. Symptoms of Salmonella Infection. Centers for Disease Control and Prevention. October 4, 2024.
  8. Hadhazy A. Cyclosporiasis: What a Stanford Medicine Expert Says About the Diarrheal Outbreak. Stanford Medicine. July 16, 2026.
  9. Clinical Care of Cyclosporiasis. Centers for Disease Control and Prevention. February 27, 2024.
  10. Salmonella Infection. Mayo Clinic. April 30, 2025.
  11. Scallan E et al. Foodborne Illness Acquired in the United States—Major Pathogens. Emerging Infectious Diseases. January 2011.
  12. Norotovirus: Symptoms, Causes & Treatment. Cleveland Clinic. February 3, 2023.
  13. Campylobacter Infection. Cleveland Clinic. May 19, 2025.
  14. Ahn S et al. Preventing Foodborne Illness: Campylobacteriosis. Institute of Food and Agricultural Sciences. April 20, 2025.
  15. Preventing Cyclosporiasis. Centers for Disease Control and Prevention. August 7, 2026.
  16. MDHHS Updates Recommendations for Cyclosporiasis Prevention. Michigan State Department of Health and Human Services. July 13, 2026.

Tom Gavin

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Tom Gavin joined Everyday Health as copy chief in 2022 after a lengthy stint as a freelance copy editor. He has a bachelor's degree in psychology from College of the Holy Cross.

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Don Rauf

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Don Rauf has been a freelance health writer for over 12 years and his writing has been featured in HealthDay, CBS News, WebMD, U.S. News & World Report, Mental Floss, United Press ...